How are various transcripts accounted for in CNV search?
Primarily for normalizing citations using gene-and-exon nomenclatures, we use the longest transcript for a gene mapped to GRCh38 for normalizing the citation to genomic coordinates.
1
NC_000001.10
NC_000001.11
2
NC_000002.11
NC_000002.12
3
NC_000003.11
NC_000003.12
4
NC_000004.11
NC_000004.12
5
NC_000005.9
NC_000005.10
6
NC_000006.11
NC_000006.12
7
NC_000007.13
NC_000007.14
8
NC_000008.10
NC_000008.11
9
NC_000009.11
NC_000009.12
10
NC_000010.10
NC_000010.11
11
NC_000011.9
NC_000011.10
12
NC_000012.11
NC_000012.12
13
NC_000013.10
NC_000013.11
14
NC_000014.8
NC_000014.9
15
NC_000015.9
NC_000015.10
16
NC_000016.9
NC_000016.10
17
NC_000017.10
NC_000017.11
18
NC_000018.9
NC_000018.10
19
NC_000019.9
NC_000019.10
20
NC_000020.10
NC_000020.11
21
NC_000021.8
NC_000021.9
22
NC_000022.10
NC_000022.11
X
NC_000023.10
NC_000023.11
Y
NC_000024.9
NC_000024.10
