How did you solve the problem which is caused by changes in the reference genome (different genome coordinates)?
We use GRCh38 by default for normalizing CNV references across different nomenclatures, but lift over coordinates from GRCh37 (hg19) when specified by either an author or user within their nomenclature.
1
NC_000001.10
NC_000001.11
2
NC_000002.11
NC_000002.12
3
NC_000003.11
NC_000003.12
4
NC_000004.11
NC_000004.12
5
NC_000005.9
NC_000005.10
6
NC_000006.11
NC_000006.12
7
NC_000007.13
NC_000007.14
8
NC_000008.10
NC_000008.11
9
NC_000009.11
NC_000009.12
10
NC_000010.10
NC_000010.11
11
NC_000011.9
NC_000011.10
12
NC_000012.11
NC_000012.12
13
NC_000013.10
NC_000013.11
14
NC_000014.8
NC_000014.9
15
NC_000015.9
NC_000015.10
16
NC_000016.9
NC_000016.10
17
NC_000017.10
NC_000017.11
18
NC_000018.9
NC_000018.10
19
NC_000019.9
NC_000019.10
20
NC_000020.10
NC_000020.11
21
NC_000021.8
NC_000021.9
22
NC_000022.10
NC_000022.11
X
NC_000023.10
NC_000023.11
Y
NC_000024.9
NC_000024.10
